TE_22669
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSp |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.05 |
| Counts of samples | TCGA_tumor:77; TCGA_normal:1; GTEx:1839 |
| TSS | chr10(-):130133497 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_22669.1 | - | Intergenic | Non-coding | Non-coding | chr10(-):130127761,130127781,130128316,130128379,130131605,130131737,130133459,130133498 |
| teRNA_22669.2 | - | Intergenic | Non-coding | Non-coding | chr10(-):130124299,130124319,130124690,130124878,130127583,130127781,130128316,130128379,130131605,130131737,130133459,130133498 |
| teRNA_22669.3 | - | Intergenic | Non-coding | Non-coding | chr10(-):130124441,130124461,130124690,130124878,130127587,130127781,130128316,130128379,130131605,130131737,130133459,130133498 |
| teRNA_22669.4 | - | Intergenic | Non-coding | Non-coding | chr10(-):130124858,130124878,130127587,130127781,130128316,130128379,130131605,130131737,130133459,130133498 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
