TE_22515
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | SVA_E, AluSp, AluJr |
|---|---|
| TE superfamily | Alu, SVA |
| TE class | Retroposon, SINE |
| Gene | OGA |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 0.05 |
| Counts of samples | TCGA_tumor:53; TCGA_normal:1; GTEx:1145 |
| TSS | chr10(-):101820728 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_22515.1 | OGA | Chimeric | Non-coding | Non-coding | chr10(-):101786567,101786587,101787364,101789280,101820534,101820729 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
