TE_138
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MIR |
|---|---|
| TE superfamily | L2-end |
| TE order | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.44 |
| Counts of samples | TCGA_tumor:442; TCGA_normal:23; GTEx:1113 |
| TSS | chr1(-):15487113 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_138.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):15464852,15464872,15467140,15467290,15484502,15484774,15487046,15487114 |
| teRNA_138.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):15472398,15472418,15484502,15484774,15487046,15487114 |
| teRNA_138.3 | - | Intergenic | Non-coding | Non-coding | chr1(-):15484519,15484539,15484625,15484774,15487046,15487114 |
| teRNA_138.4 | - | Intergenic | Non-coding | Non-coding | chr1(-):15484030,15484050,15484502,15484774,15487046,15487114 |
| teRNA_138.5 | - | Intergenic | Non-coding | Non-coding | chr1(-):15464852,15464872,15486488,15486623,15487046,15487114 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
