TE_134
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MLT1H |
|---|---|
| TE superfamily | MaLR |
| TE class | LTR |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 2.73 |
| Counts of samples | TCGA_tumor:130; TCGA_normal:5; GTEx:48 |
| TSS | chr1(-):15340494 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_134.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):15338433,15338453,15338796,15338963,15340380,15340495 |
| teRNA_134.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):15338574,15338594,15338796,15338963,15340380,15340495 |
| teRNA_134.3 | - | Intergenic | Non-coding | Non-coding | chr1(-):15338433,15338453,15338796,15338941,15340380,15340495 |
| teRNA_134.4 | - | Intergenic | Non-coding | Non-coding | chr1(-):15338433,15338453,15338796,15338963,15339455,15339506,15340380,15340495 |
| teRNA_134.5 | - | Intergenic | Non-coding | Non-coding | chr1(-):15338433,15338453,15338796,15338963,15339455,15339594,15340380,15340495 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
