TE_129
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MLT1E1A |
|---|---|
| TE superfamily | MaLR |
| TE class | LTR |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 5.52 |
| Counts of samples | TCGA_tumor:92; TCGA_normal:2; GTEx:16 |
| TSS | chr1(-):14737855 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_129.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):14735885,14735905,14737577,14737856 |
| teRNA_129.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):14726590,14726610,14735671,14735905,14737577,14737856 |
| teRNA_129.3 | - | Intergenic | Non-coding | Non-coding | chr1(-):14733568,14733588,14735671,14735905,14737577,14737856 |
| teRNA_129.4 | - | Intergenic | Non-coding | Non-coding | chr1(-):14726590,14726610,14727823,14727927,14735671,14735905,14737577,14737856 |
| teRNA_129.5 | - | Intergenic | Non-coding | Non-coding | chr1(-):14733681,14733701,14735671,14735905,14737577,14737856 |
| teRNA_129.6 | - | Intergenic | Non-coding | Non-coding | chr1(-):14736679,14736699,14737577,14737856 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
