TE_12689
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1P3_5end, L1PA10_5end |
|---|---|
| TE superfamily | L1 |
| TE order | LINE |
| Gene | CMYA5 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 0.06 |
| Counts of samples | TCGA_tumor:7; TCGA_normal:0; GTEx:147 |
| TSS | chr5(+):79769697 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_12689.1 | CMYA5 | Chimeric | Non-coding | Non-coding | chr5(+):79769698,79769726,79788971,79789104,79790970,79791069,79793437,79793610,79799370,79799390 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
