TE_124
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluYj4 |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 2.42 |
| Counts of samples | TCGA_tumor:72; TCGA_normal:0; GTEx:33 |
| TSS | chr1(-):13825693 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_124.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):13823224,13823244,13824829,13825024,13825663,13825694 |
| teRNA_124.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):13822982,13823002,13823127,13825024,13825663,13825694 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
