TE_121
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | HERVIP10F |
|---|---|
| TE superfamily | ERV1 |
| TE class | LTR |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 5.82 |
| Counts of samples | TCGA_tumor:61; TCGA_normal:1; GTEx:10 |
| TSS | chr1(-):12713098 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_121.1 | - | Intergenic | Non-coding | Non-coding | chr1(-):12703650,12703670,12703835,12703965,12713015,12713099 |
| teRNA_121.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):12703945,12703965,12707375,12707588,12713015,12713099 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
