TE_101
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | MLT1J |
|---|---|
| TE superfamily | MaLR |
| TE class | LTR |
| Gene | -, TMEM274P |
| Class | Chimeric, Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 0.40 |
| Counts of samples | TCGA_tumor:343; TCGA_normal:40; GTEx:920 |
| TSS | chr1(-):9996745 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_101.1 | TMEM274P | Chimeric | Non-coding | Non-coding | chr1(-):9950628,9950648,9951231,9951297,9952339,9952469,9991624,9991693,9996679,9996746 |
| teRNA_101.2 | - | Intergenic | Non-coding | Non-coding | chr1(-):9991862,9991882,9992408,9992546,9996679,9996746 |
| teRNA_101.3 | - | Intergenic | Non-coding | Non-coding | chr1(-):9990388,9990408,9991624,9991693,9992408,9992546,9996679,9996746 |
| teRNA_101.4 | TMEM274P | Chimeric | Non-coding | Non-coding | chr1(-):9950628,9950648,9951231,9951297,9952339,9952469,9996679,9996746 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
