TE_1
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSx1 |
|---|---|
| TE superfamily | Alu |
| TE order | SINE |
| Gene | ENSG00000241860 |
| Class | Chimeric |
| Coding | Non-coding |
| Tumor-specific score | 0.11 |
| Counts of samples | TCGA_tumor:90; TCGA_normal:4; GTEx:913 |
| TSS | chr1(-):175362 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_1.1 | ENSG00000241860 | Chimeric | Non-coding | Non-coding | chr1(-):146489,146509,155767,155831,164263,164791,165884,165942,168100,168165,169049,169264,172557,172688,173753,173862,175324,175363 |
1
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
