SVA_E
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-KICH | 0.14 | 2.00e-03 |
| TCGA-LUSC | 0.67 | 2.00e-03 |
| TCGA-HNSC | 0.70 | 7.00e-03 |
| TCGA-ESCA | 0.52 | 7.00e-03 |
| TCGA-UVM | 0.33 | 0.01 |
| TCGA-KIRC | 0.68 | 0.01 |
| TCGA-COAD | 0.49 | 0.02 |
| TCGA-THCA | 0.33 | 0.03 |
| TCGA-LUAD | 0.72 | 0.03 |
| TCGA-READ | 2.06 | 0.04 |