MSTA
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LGG | 2.08 | 0.00e+00 |
| TCGA-PRAD | 0.13 | 1.00e-03 |
| TCGA-PAAD | 0.41 | 1.00e-03 |
| TCGA-LUSC | 0.59 | 2.00e-03 |
| TCGA-KICH | 0.10 | 5.00e-03 |
| TCGA-STAD | 1.78 | 5.00e-03 |
| TCGA-ESCA | 0.53 | 0.01 |
| TCGA-OV | 1.47 | 0.02 |
| TCGA-THYM | 0.26 | 0.02 |
| TCGA-MESO | 2.24 | 0.02 |