FordPrefect
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-SKCM | 2.15 | 0.28 |
| TCGA-LUSC | 0.86 | 0.34 |
| TCGA-BRCA | 0.83 | 0.35 |
| TCGA-LUAD | 0.85 | 0.41 |
| TCGA-OV | 0.89 | 0.42 |
| TCGA-STAD | 0.86 | 0.51 |
| TCGA-PAAD | 0.87 | 0.73 |
| TCGA-LIHC | 1.08 | 0.74 |
| TCGA-MESO | 0.91 | 0.78 |
| TCGA-CESC | 1.10 | 0.82 |