FRAM
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-ESCA | 2.34 | 0.04 |
| TCGA-UCEC | 1.61 | 0.04 |
| TCGA-BLCA | 0.64 | 0.04 |
| TCGA-READ | 2.09 | 0.04 |
| TCGA-SARC | 0.63 | 0.04 |
| TCGA-UCS | 0.44 | 0.05 |
| TCGA-LUAD | 0.75 | 0.06 |
| TCGA-CHOL | 0.34 | 0.07 |
| TCGA-SKCM | 2.48 | 0.09 |
| TCGA-KIRP | 0.62 | 0.10 |