Charlie5
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
Tumor | HR | P_value |
---|---|---|
TCGA-ESCA | 0.45 | 0.01 |
TCGA-UCS | 0.43 | 0.05 |
TCGA-LIHC | 0.63 | 0.10 |
TCGA-SARC | 0.59 | 0.17 |
TCGA-GBM | 0.69 | 0.23 |
TCGA-PAAD | 0.67 | 0.27 |
TCGA-CHOL | 1.72 | 0.28 |
TCGA-DLBC | 2.84 | 0.28 |
TCGA-SKCM | 1.80 | 0.31 |
TCGA-LGG | 1.24 | 0.38 |