Charlie20a
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-STAD | 1.74 | 0.01 |
| TCGA-KIRC | 0.68 | 0.07 |
| TCGA-KICH | 2.45 | 0.15 |
| TCGA-CESC | 0.68 | 0.30 |
| TCGA-ESCA | 0.69 | 0.31 |
| TCGA-CHOL | 0.62 | 0.33 |
| TCGA-KIRP | 1.77 | 0.42 |
| TCGA-DLBC | 0.49 | 0.47 |
| TCGA-LIHC | 0.94 | 0.79 |
| TCGA-PRAD | NA | 1.00 |
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