Charlie15a
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-READ | 8.72 | 0.00e+00 |
| TCGA-COAD | 1.91 | 9.00e-03 |
| TCGA-LUAD | 1.37 | 0.03 |
| TCGA-UCS | 2.17 | 0.04 |
| TCGA-UVM | 2.54 | 0.04 |
| TCGA-LIHC | 1.76 | 0.04 |
| TCGA-HNSC | 0.72 | 0.05 |
| TCGA-KIRC | 1.45 | 0.06 |
| TCGA-SARC | 0.65 | 0.09 |
| TCGA-TGCT | 0.26 | 0.09 |