Chap1_Mam
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-SKCM | 3.07 | 2.00e-03 |
| TCGA-GBM | 0.45 | 2.00e-03 |
| TCGA-THYM | 10.00 | 5.00e-03 |
| TCGA-LUSC | 0.66 | 0.01 |
| TCGA-UVM | 5.05 | 0.01 |
| TCGA-CESC | 0.45 | 0.02 |
| TCGA-KIRP | 2.58 | 0.06 |
| TCGA-KICH | 0.36 | 0.09 |
| TCGA-READ | 3.14 | 0.09 |
| TCGA-BRCA | 0.64 | 0.09 |