AluSz6
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-STAD | 0.74 | 0.06 |
| TCGA-LAML | 0.62 | 0.06 |
| TCGA-LUAD | 0.76 | 0.07 |
| TCGA-HNSC | 0.70 | 0.07 |
| TCGA-OV | 0.71 | 0.08 |
| TCGA-BRCA | 0.73 | 0.09 |
| TCGA-PRAD | 3.73 | 0.10 |
| TCGA-UCEC | 1.42 | 0.10 |
| TCGA-THYM | 2.85 | 0.10 |
| TCGA-KICH | 3.67 | 0.11 |