AluSz6
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-CHOL | 0.21 | 1.00e-03 |
| TCGA-SARC | 0.58 | 6.00e-03 |
| TCGA-THCA | 0.23 | 7.00e-03 |
| TCGA-LGG | 1.62 | 8.00e-03 |
| TCGA-SKCM | 2.33 | 0.02 |
| TCGA-READ | 2.87 | 0.03 |
| TCGA-ESCA | 1.86 | 0.03 |
| TCGA-GBM | 1.45 | 0.03 |
| TCGA-PCPG | 3.71 | 0.05 |
| TCGA-LUSC | 1.33 | 0.06 |