AluSx
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-BLCA | 2.15 | 0.00e+00 |
| TCGA-THCA | 0.22 | 1.00e-03 |
| TCGA-LGG | 1.73 | 2.00e-03 |
| TCGA-STAD | 0.46 | 3.00e-03 |
| TCGA-UCS | 0.28 | 4.00e-03 |
| TCGA-READ | 2.62 | 5.00e-03 |
| TCGA-KICH | 0.10 | 5.00e-03 |
| TCGA-BRCA | 1.68 | 9.00e-03 |
| TCGA-CHOL | 3.99 | 0.01 |
| TCGA-PAAD | 0.60 | 0.01 |