AluSq2
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LIHC | 1.60 | 0.08 |
| TCGA-THCA | 2.30 | 0.09 |
| TCGA-LGG | 0.66 | 0.09 |
| TCGA-PRAD | 2.67 | 0.09 |
| TCGA-BRCA | 0.74 | 0.09 |
| TCGA-LUAD | 0.73 | 0.11 |
| TCGA-COAD | 1.37 | 0.11 |
| TCGA-BLCA | 0.79 | 0.11 |
| TCGA-ESCA | 1.64 | 0.12 |
| TCGA-HNSC | 0.80 | 0.12 |