AluSq2
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-MESO | 0.42 | 0.00e+00 |
| TCGA-READ | 0.17 | 1.00e-03 |
| TCGA-UCS | 0.38 | 0.01 |
| TCGA-UCEC | 1.91 | 0.02 |
| TCGA-DLBC | 3.75 | 0.03 |
| TCGA-LAML | 1.54 | 0.04 |
| TCGA-KIRC | 1.37 | 0.04 |
| TCGA-ACC | 0.39 | 0.05 |
| TCGA-SKCM | 2.74 | 0.06 |
| TCGA-LIHC | 1.60 | 0.08 |