AluSq10
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LGG | 2.12 | 0.00e+00 |
| TCGA-LIHC | 2.30 | 3.00e-03 |
| TCGA-HNSC | 0.69 | 5.00e-03 |
| TCGA-OV | 0.72 | 8.00e-03 |
| TCGA-CESC | 0.59 | 0.02 |
| TCGA-KIRP | 2.62 | 0.02 |
| TCGA-DLBC | 3.71 | 0.02 |
| TCGA-READ | 3.30 | 0.03 |
| TCGA-ESCA | 0.59 | 0.04 |
| TCGA-BLCA | 0.71 | 0.04 |