AluSq
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-OV | 0.77 | 0.04 |
| TCGA-KICH | 2.98 | 0.05 |
| TCGA-ESCA | 1.53 | 0.05 |
| TCGA-DLBC | 3.00 | 0.06 |
| TCGA-BLCA | 1.41 | 0.06 |
| TCGA-THCA | 2.64 | 0.06 |
| TCGA-UVM | 2.60 | 0.07 |
| TCGA-HNSC | 0.75 | 0.08 |
| TCGA-LGG | 1.36 | 0.08 |
| TCGA-GBM | 0.67 | 0.08 |