AluSg4
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-STAD | 1.52 | 0.02 |
| TCGA-PAAD | 1.54 | 0.03 |
| TCGA-THYM | 3.02 | 0.05 |
| TCGA-THCA | 0.38 | 0.05 |
| TCGA-UCS | 0.55 | 0.06 |
| TCGA-UVM | 0.31 | 0.06 |
| TCGA-BLCA | 0.75 | 0.08 |
| TCGA-TGCT | 0.26 | 0.09 |
| TCGA-KICH | 0.35 | 0.10 |
| TCGA-PCPG | 3.33 | 0.11 |