AluSg4
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LUSC | 1.74 | 0.00e+00 |
| TCGA-LIHC | 1.97 | 1.00e-03 |
| TCGA-OV | 1.43 | 3.00e-03 |
| TCGA-KIRC | 1.62 | 8.00e-03 |
| TCGA-UCEC | 1.69 | 9.00e-03 |
| TCGA-SKCM | 3.60 | 9.00e-03 |
| TCGA-CHOL | 0.34 | 9.00e-03 |
| TCGA-CESC | 0.58 | 0.01 |
| TCGA-LGG | 1.95 | 0.01 |
| TCGA-SARC | 1.76 | 0.01 |