AluSg
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-BLCA | 1.58 | 5.00e-03 |
| TCGA-KIRP | 0.47 | 7.00e-03 |
| TCGA-LGG | 1.55 | 0.01 |
| TCGA-SARC | 0.59 | 0.01 |
| TCGA-LAML | 1.88 | 0.02 |
| TCGA-UVM | 0.40 | 0.03 |
| TCGA-LUAD | 0.71 | 0.03 |
| TCGA-READ | 2.59 | 0.04 |
| TCGA-GBM | 0.66 | 0.04 |
| TCGA-ESCA | 1.56 | 0.05 |