AluSc5
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LIHC | 1.88 | 1.00e-03 |
| TCGA-PRAD | 11.00 | 3.00e-03 |
| TCGA-BRCA | 1.63 | 0.01 |
| TCGA-KIRC | 1.43 | 0.01 |
| TCGA-OV | 0.72 | 0.01 |
| TCGA-COAD | 1.84 | 0.02 |
| TCGA-SKCM | 2.40 | 0.02 |
| TCGA-READ | 2.08 | 0.04 |
| TCGA-BLCA | 0.69 | 0.04 |
| TCGA-ESCA | 0.54 | 0.05 |