AluSc
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-HNSC | 0.57 | 1.00e-03 |
| TCGA-KICH | 0.25 | 0.01 |
| TCGA-SKCM | 0.31 | 0.01 |
| TCGA-PAAD | 1.65 | 0.01 |
| TCGA-READ | 2.34 | 0.03 |
| TCGA-CESC | 0.49 | 0.03 |
| TCGA-THCA | 0.41 | 0.03 |
| TCGA-LIHC | 1.54 | 0.03 |
| TCGA-COAD | 0.64 | 0.04 |
| TCGA-PCPG | 3.71 | 0.05 |