TE_38977
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | AluSq2 |
|---|---|
| TE superfamily | Alu |
| TE class | SINE |
| Gene | TTTY14 |
| Class | Chimeric |
| Coding | Non-coding, Other |
| Tumor-specific score | 0.36 |
| Counts of samples | TCGA_tumor:74; TCGA_normal:12; GTEx:224 |
| TSS | chrY(-):18919645 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_38977.21 | TTTY14 | Chimeric | Other | MELPASPSAVPRHSSALGQSMRPVALEQGEGSSGRLGPCRSPRWGGRRLRHGRLQVPSSALPGGSLRPHEKSSTAAAGPGAKPLTAWGLRVGLTLPGQGQQSPRPPRTPAGPQAPCGSPGSRPRLSLHTSQEAEGAGSRHGQPRKGLPQGSGGLKDSSAAKEARRAIKGCEGCQHTVTSQAEMRDTNLEMRKEDFTIYRLGSKKMMMNMCSKVRNKIKAKIKDVLFLLWIFLFLYLLIF* | chrY(-):18807445,18807465,18813616,18813743,18819355,18819460,18819554,18819786,18828585,18828719,18830436,18830639,18833002,18833103,18833756,18836407,18838752,18838872,18839182,18839313,18877068,18882198,18919534,18919646 |
| teRNA_38977.22 | TTTY14 | Chimeric | Other | MELPASPSAVPRHSSALGQSMRPVALEQGEGSSGRLGPCRSPRWGGRRLRHGRLQVPSSALPGGSLRPHEKSSTAAAGPGAKPLTAWGLRVGLTLPGQGQQSPRPPRTPAGPQAPCGSPGSRPRLSLHTSQEAEGAGSRHGQPRKGLPQGSGGLKDSSAAKEARRAIKGCEGCQHTVTSQAEMRDTNLEMRKEDFTIYRLGSKKMMMNMCSKVRNKIKAKIKDVLFLLWIFLFLYLLIF* | chrY(-):18872814,18872834,18877068,18882198,18919534,18919646 |
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
