TE_19187
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1P1_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 177.86 |
| Counts of samples | TCGA_tumor:788; TCGA_normal:3; GTEx:1 |
| TSS | chr8(-):117191879 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_19187.51 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117088466,117090554,117096043,117096099,117108642,117108737,117172615,117172745,117173360,117173488,117191539,117191880 |
| teRNA_19187.52 | - | Intergenic | Non-coding | Non-coding | chr8(-):117117766,117117786,117172615,117172745,117173360,117173488,117191539,117191880 |
| teRNA_19187.53 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117105997,117106115,117108642,117108737,117172615,117172745,117173360,117173488,117191539,117191880 |
| teRNA_19187.54 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117108642,117108737,117172615,117172745,117173360,117173488,117191699,117191880 |
| teRNA_19187.55 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117172615,117172745,117173360,117173488,117191699,117191880 |
| teRNA_19187.56 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117105997,117106115,117108595,117108737,117172615,117172745,117173360,117173488,117191699,117191880 |
| teRNA_19187.57 | - | Intergenic | Non-coding | Non-coding | chr8(-):117108717,117108737,117172615,117172745,117173360,117173488,117191699,117191880 |
| teRNA_19187.58 | - | Intergenic | Non-coding | Non-coding | chr8(-):117106095,117106115,117108642,117108737,117172615,117172745,117173360,117173488,117191699,117191880 |
| teRNA_19187.59 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117105997,117106115,117108642,117109529,117172615,117172745,117173360,117173488,117191699,117191880 |
| teRNA_19187.60 | - | Intergenic | Non-coding | Non-coding | chr8(-):117086649,117086669,117108642,117109529,117172615,117172745,117173360,117173488,117191699,117191880 |
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
