TE_19169
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE order | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 669.49 |
| Counts of samples | TCGA_tumor:593; TCGA_normal:0; GTEx:0 |
| TSS | chr8(-):114504396 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_19169.21 | - | Intergenic | Non-coding | Non-coding | chr8(-):114318935,114318955,114394910,114394987,114504286,114504397 |
| teRNA_19169.22 | - | Intergenic | Non-coding | Non-coding | chr8(-):114328709,114328729,114394910,114394987,114504286,114504397 |
| teRNA_19169.23 | - | Intergenic | Non-coding | Non-coding | chr8(-):114372491,114372511,114394910,114394987,114504286,114504397 |
| teRNA_19169.24 | - | Intergenic | Non-coding | Non-coding | chr8(-):114178734,114178754,114202631,114202728,114202965,114203048,114270675,114270736,114292133,114295574,114296448,114296486,114298562,114298677,114303051,114303144,114304407,114304495,114394910,114394987,114504286,114504397 |
| teRNA_19169.25 | - | Intergenic | Non-coding | Non-coding | chr8(-):114260578,114260598,114261012,114261119,114270675,114270736,114292133,114298677,114303051,114303144,114304407,114304495,114394910,114394987,114504286,114504397 |
| teRNA_19169.26 | - | Intergenic | Non-coding | Non-coding | chr8(-):114295377,114295397,114296448,114296486,114298562,114298677,114303051,114303144,114304407,114304495,114394910,114394987,114504286,114504397 |
| teRNA_19169.27 | - | Intergenic | Non-coding | Non-coding | chr8(-):114178734,114178754,114202631,114202728,114202965,114203048,114298562,114298677,114303051,114303144,114304407,114304495,114318319,114318955,114319086,114319269,114394910,114394987,114504286,114504397 |
| teRNA_19169.28 | - | Intergenic | Non-coding | Non-coding | chr8(-):114388326,114388346,114394910,114394987,114504286,114504397 |
| teRNA_19169.29 | - | Intergenic | Non-coding | Non-coding | chr8(-):114178734,114178754,114202631,114202728,114202965,114203048,114270639,114270736,114296448,114296486,114298562,114298677,114303051,114303144,114304407,114304495,114394910,114394987,114504286,114504397 |
| teRNA_19169.30 | - | Intergenic | Non-coding | Non-coding | chr8(-):114178734,114178754,114202631,114202728,114202965,114203048,114394910,114394987,114504286,114504397 |
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
