TE_14908
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1PBa1_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | - |
| Class | Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 513.96 |
| Counts of samples | TCGA_tumor:455; TCGA_normal:0; GTEx:0 |
| TSS | chr6(+):84340629 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_14908.11 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84343652,84343731,84430035,84430055 |
| teRNA_14908.12 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84343652,84343731,84369944,84370010,84370444,84370464 |
| teRNA_14908.13 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84343652,84343731,84369918,84370010,84370444,84370673,84372335,84372355 |
| teRNA_14908.14 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84343652,84343731,84369918,84370010,84370444,84370673,84453267,84453327,84519753,84519773 |
| teRNA_14908.15 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84343652,84343731,84369918,84370010,84370444,84370673,84430035,84430055 |
| teRNA_14908.16 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84341250,84341404,84369918,84370010,84370444,84370464 |
| teRNA_14908.17 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84341250,84341404,84341526,84341546 |
| teRNA_14908.18 | - | Intergenic | Non-coding | Non-coding | chr6(+):84340630,84340752,84341250,84341404,84341526,84341667,84343652,84343731,84369918,84370010,84370444,84370464 |
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GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
