TE_11709
Basic information Differential Expression Stage analysis Survival analysis Correlation analysis| TE family | L1HS_5end |
|---|---|
| TE superfamily | L1 |
| TE class | LINE |
| Gene | -, ENSG00000251361 |
| Class | Chimeric, Intergenic |
| Coding | Non-coding |
| Tumor-specific score | 176.95 |
| Counts of samples | TCGA_tumor:470; TCGA_normal:2; GTEx:0 |
| TSS | chr5(-):93213276 |
Transcript isoforms
| Transcript_ID | Gene | Class | Coding | ORF | Position |
|---|---|---|---|---|---|
| teRNA_11709.21 | - | Intergenic | Non-coding | Non-coding | chr5(-):93082794,93082814,93090366,93090437,93149826,93149906,93213128,93213277 |
| teRNA_11709.22 | ENSG00000251361 | Chimeric | Non-coding | Non-coding | chr5(-):93020116,93020136,93051670,93051776,93068626,93068667,93074353,93075750,93090366,93090437,93149826,93149906,93213128,93213277 |
| teRNA_11709.23 | - | Intergenic | Non-coding | Non-coding | chr5(-):93068647,93068667,93075658,93075750,93090366,93090437,93149826,93149906,93213128,93213277 |
| teRNA_11709.24 | - | Intergenic | Non-coding | Non-coding | chr5(-):93110566,93110586,93149826,93149906,93213128,93213277 |
GTEx
The proportion of samples in which the TE-initiated transcript was expressed across 46 body sites in the Genotype-Tissue Expression (GTEx) project.
TCGA
The proportion of samples in which the TE-initiated transcript was expressed across 33 cancer types from The Cancer Genome Atlas (TCGA).
GTEx
The expression of TE-initiated transcript across 46 body sites from The Genotype-Tissue Expression (GTEx) project.
