MSTB
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-UCS | 2.13 | 0.02 |
| TCGA-GBM | 0.66 | 0.02 |
| TCGA-MESO | 0.60 | 0.02 |
| TCGA-UVM | 0.47 | 0.04 |
| TCGA-STAD | 1.73 | 0.04 |
| TCGA-HNSC | 0.77 | 0.05 |
| TCGA-LIHC | 1.44 | 0.07 |
| TCGA-TGCT | 5.00 | 0.08 |
| TCGA-CESC | 0.66 | 0.10 |
| TCGA-ESCA | 1.47 | 0.11 |