Charlie2a
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LGG | 0.65 | 0.02 |
| TCGA-BLCA | 1.57 | 0.02 |
| TCGA-KICH | 4.96 | 0.02 |
| TCGA-UVM | 2.36 | 0.03 |
| TCGA-SARC | 1.56 | 0.03 |
| TCGA-PCPG | 3.71 | 0.05 |
| TCGA-ACC | 0.50 | 0.05 |
| TCGA-TGCT | 5.00 | 0.08 |
| TCGA-SKCM | 1.88 | 0.09 |
| TCGA-THCA | 0.43 | 0.10 |