Charlie29a
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-SKCM | 1.58 | 0.20 |
| TCGA-GBM | 1.26 | 0.20 |
| TCGA-THYM | 2.29 | 0.20 |
| TCGA-LAML | 1.42 | 0.21 |
| TCGA-HNSC | 0.85 | 0.22 |
| TCGA-THCA | 0.52 | 0.29 |
| TCGA-STAD | 1.28 | 0.32 |
| TCGA-MESO | 1.38 | 0.32 |
| TCGA-BRCA | 1.18 | 0.36 |
| TCGA-LGG | 1.20 | 0.41 |