Charlie17b
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LIHC | 0.68 | 0.17 |
| TCGA-THCA | 2.21 | 0.18 |
| TCGA-SARC | 1.45 | 0.19 |
| TCGA-STAD | 1.25 | 0.21 |
| TCGA-UCS | 0.63 | 0.22 |
| TCGA-HNSC | 0.77 | 0.24 |
| TCGA-ESCA | 0.75 | 0.24 |
| TCGA-KIRC | 1.25 | 0.29 |
| TCGA-LUSC | 1.21 | 0.30 |
| TCGA-GBM | 1.20 | 0.34 |