AluSp
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-LUSC | 1.34 | 0.03 |
| TCGA-KIRP | 0.46 | 0.04 |
| TCGA-DLBC | 0.28 | 0.04 |
| TCGA-GBM | 1.74 | 0.05 |
| TCGA-UCS | 0.56 | 0.08 |
| TCGA-SKCM | 1.86 | 0.08 |
| TCGA-OV | 1.27 | 0.08 |
| TCGA-PRAD | 3.09 | 0.09 |
| TCGA-LGG | 1.35 | 0.09 |
| TCGA-ACC | 0.54 | 0.09 |