AluJo
Basic information Differential Expression Stage analysis Survival analysis Correlation analysisThe patients were classified into two groups based on the expression levels of TE families or the identification of TE-initiated transcripts. To assess the statistical difference in survival between the two groups, a log-rank test was performed. The hazard ratio (HR) and p-value were computed using the "survdiff" function from the "survival" package in R.
| Tumor | HR | P_value |
|---|---|---|
| TCGA-THYM | 3.38 | 0.04 |
| TCGA-GBM | 1.42 | 0.05 |
| TCGA-KICH | 0.33 | 0.05 |
| TCGA-BLCA | 1.34 | 0.06 |
| TCGA-STAD | 1.48 | 0.07 |
| TCGA-PRAD | 3.09 | 0.09 |
| TCGA-UCEC | 0.58 | 0.09 |
| TCGA-PAAD | 1.67 | 0.11 |
| TCGA-LIHC | 1.56 | 0.11 |
| TCGA-THCA | 2.51 | 0.12 |